INTERLEUKIN 28B (IL28B) POLYMORPHISM (rS12979860)

General Information

HLAB/HOL Code: IL28B
UPHSM LIS Test #: 027937
Schedule:
Testing Time: 5-7 Days
Testing Lab: Labcorp

Specimen Info
Only 1 specimen type required, unless otherwise specified

Volume: 7.0 mL
Temperature: Refrigerated
Tube Type: Whole Blood
Collection Info:
Minimum Volume: 3 mL whole blood OR two buccal swabs
Container: Lavender-Top (EDTA) tube, yellow-top (ACD) tube, OR LabCorp buccal swab kit
Volume: 2 swabs
Temperature: Ambient
Tube Type: LabCorp Buccal Swab Kit
Collection Info:

Specimen Acceptability

Cause for Rejection:
Frozen specimen; hemolysis; quantity not sufficient; improper container; one buccal swab; wet buccal swab

Methods

Real-time polymerase chain reaction (PCR) with allele-specific TaqMan® probes is used to detect a single nucleotide polymorphism (SNP) (rs12979860 C/T) on chromosome 19q13. The rs12979860 SNP maps 3 kilobases upstream of the IL28B gene (OMIM 607402), which encodes the type III interferon-λ3. No other polymorphisms are detected by this assay.

Clinical Utilities

Genome-wide association studies have identified a single nucleotide polymorphism (SNP) (rs12979860) upstream of the IL28B gene, which is associated with higher sustained viral response rates to pegylated interferon/ribavirin therapy in HCV genotype 1-infected individuals. The CC genotype, as compared to either the CT or TT genotypes, has been associated with an approximately twofold to threefold greater rate of sustained viral response in hepatitis C virus genotype 1 chronically-infected individuals treated with combination pegylated interferon/ribavirin therapy.  Similar sustained viral response associations across various racial groups including European Americans (95% CI 1.8-2.3), African Americans (95% CI 1.9-4.7), and Hispanics (95% CI 1.4-3.2) have been observed.  The CC genotype has also been associated with a threefold increase in rate of spontaneous clearance of HCV.  Allele frequencies for the rs12979860 C allele vary across racial and ethnic groups. The rs12979860 C variant is most frequently present in individuals from East Asia (allele frequency >0.9) and least common in individuals of African origin (allele frequency 0.2-0.5).2 In a recent US-based study, the favorable CC genotype was observed in 37% of Caucasians, 29% of Hispanics, and 14% of African Americans tested.

CPT Codes

81400

* The CPT codes provided are based on AMA guidelines and are for informational purposes only. CPT coding
is the sole responsibility of the billing party. Please direct any questions regarding coding to the payer being billed.

Reference Range

An Interpretative Report Sent